Introduction
Database
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Goals of the database
Sequence based search
Search by SSR loci
Submission of data
Acknowledgements
Species
Genetic Markers
Hosts
Appendix
Sequence Download
Search by sequence
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BLAST Search
For simultaneous Blast search with sequences from up to four loci, click
Search by multi-locus
.
Dataset :
60S Ribosomal Protein L10
Beta Tubulin
Enolase
Heat Shock Protein 90
Internal transcribed spacer region of rDNA
Large Subunit rRNA
Mitochondrial cox1 locus
Mitochondrial cox2 locus
Mitochondrial NADH Dehydrogenase Subunit 1
Mitochondrial NADH Dehydrogenase Subunit 9
Mitochondrial Ribosomal Protein S10
Mitochondrial Sec-Independent Transporter Protein
TEF1(v.2.0)
TigA gene fusion
Limit E-value :
1e-50
1e-40
1e-30
1e-20
1e-10
1e-5
0.0001
0.01
1
Matrix :
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Sequences (FASTA)
Clear
Start Search
Current Statistics of the Database
123
formally described species
23
provisional species
2,623
Isolates
6,315
Sequences
Database News
2013-07-10
Sequence download is available.
2010-10-27
Sequences of additional mitochondrial maker genes have been posted.
2010-09-02
Tool for monitoring population dynamics
Link to Contributors